- s -

sAddonManager() : sAddonManager
SampleConditionalClustering() : iRCPGSAlgorithm
SampleConditionalClusterIntensity() : iRCPGSAlgorithm
SampleConditionalCompleteData() : iRCPGSAlgorithm
SaveDebugImage() : oImageSpace
SaveIntermediaryData() : iRCPGSAlgorithm
SaveLUTFlag() : sScannerManager
SaveOutputBasisCoefficientImage() : oImageSpace
SaveOutputImage() : oImageSpace
SaveParametricImages() : oDynamicModelManager , vDynamicModel
SaveSensitivityImage() : oImageSpace
sChronoManager() : sChronoManager
SensitivitySpecificOperations() : iOptimizerADMMLim , iOptimizerAPPGML , iOptimizerBSREM , iOptimizerLandweber , iOptimizerMLEM , iOptimizerMLMuMap , iOptimizerMLTR , iOptimizerModifiedEMForMRFPenalizedML , iOptimizerNEGML , iOptimizerOneStepLate , iOptimizerOriginalAML , iOptimizerPenalizedPreconditionedGradientML , iOptimizerSens , iOptimizerTemplate , vOptimizer
SetAcquisitionTime() : oImageDimensionsAndQuantification
SetApplyPOI() : vProjector
SetApplyTOF() : vProjector
SetAtnCorrectionFlagOn() : iDataFilePET
SetAttenuationCorrectionFactor() : iEventNorm , iEventPET
SetAttenuationImage() : vOptimizer
SetBackwardProjector() : oProjectionLine
SetBedIndex() : vDataFile
SetBedOffset() : oProjectionLine
SetBinaryDataFileName() : vDataFile
SetBlankValue() : iEventCT
SetCalibrationFactor() : oImageDimensionsAndQuantification , vDataFile
SetCardBasisFunctions() : oImageDimensionsAndQuantification
SetCardBasisFunctionsFile() : oImageDimensionsAndQuantification
SetCardMotionFlagOn() : oDynamicDataManager , oImageDimensionsAndQuantification
SetCardStaticFlag() : oImageDimensionsAndQuantification
SetComputationStrategy() : oProjectionLine , oProjectorManager
SetComputeFromHistogramFlag() : oSensitivityGenerator
SetCurrentIteration() : oOptimizerManager , vOptimizer
SetCurrentSubset() : oOptimizerManager , vOptimizer
SetCurrentTOFBin() : oProjectionLine
SetCustomFLTData() : oProjectionLine , vEvent
SetCustomINTData() : oProjectionLine , vEvent
SetDataFile() : oAnalyticProjection , oOptimizerManager , oProjectorManager , oSensitivityGenerator , vAlgorithm , vOptimizer , vPenalty
SetDataFileName() : sOutputManager
SetDataMode() : oDeformationManager , oOptimizerManager , vDataFile , vOptimizer
SetDataSpec() : oOptimizerManager , vOptimizer
SetDataType() : oOptimizerManager , vDataFile , vOptimizer
SetDefault() : oImageDimensionsAndQuantification
SetDeformationManager() : oSensitivityGenerator , vAlgorithm
SetDetectorRotDirection() : iDataFileCT
SetDiagonalCardBasisFunctions() : oDynamicModelManager
SetDiagonalRespBasisFunctions() : oDynamicModelManager
SetDiagonalTimeBasisFunctions() : oDynamicModelManager
SetDuration() : vDataFile
SetDynamicModelManager() : vAlgorithm
SetDynamicSpecificQuantificationFactors() : oDynamicDataManager , oImageDimensionsAndQuantification
SetEventIndex() : oProjectionLine , vEvent
SetEventKindFlagOn() : iDataFileCT , iDataFilePET , iDataFileSPECT
SetEventNbTOFBins() : iEventHistoPET
SetEventTOFResolutionInPs() : iEventListPET
SetEventValue() : iEventCT , iEventHistoCT , iEventHistoPET , iEventHistoSPECT , iEventListCT , iEventListPET , iEventListSPECT , iEventNorm , iEventPET , iEventSPECT , vEvent
SetFlipOut() : oImageDimensionsAndQuantification
SetFOMFlag() : vOptimizer
SetForwardProjector() : oProjectionLine
SetFOVOutMasking() : oImageDimensionsAndQuantification
SetFOVSizeX() : oImageDimensionsAndQuantification
SetFOVSizeY() : oImageDimensionsAndQuantification
SetFOVSizeZ() : oImageDimensionsAndQuantification
SetFrames() : oArterialInputCurve , oImageDimensionsAndQuantification
SetGPUflag() : oAnalyticProjection , oSensitivityGenerator , vAlgorithm
SetHasTOFInfo() : iEventListPET
SetHeaderDataFileName() : vDataFile
SetHeadRotDirection() : iDataFileSPECT
SetID1() : vEvent
SetID2() : vEvent
SetIgnoreAttnCorrectionFlag() : iDataFilePET , oImageDimensionsAndQuantification
SetIgnoreBratCorrectionFlag() : oImageDimensionsAndQuantification
SetIgnoreCaliCorrectionFlag() : oImageDimensionsAndQuantification
SetIgnoredCorrections() : oImageDimensionsAndQuantification
SetIgnoreDecaCorrectionFlag() : oImageDimensionsAndQuantification
SetIgnoreFdurCorrectionFlag() : oImageDimensionsAndQuantification
SetIgnoreNormCorrectionFlag() : iDataFilePET , oImageDimensionsAndQuantification
SetIgnorePOIFlag() : vDataFile
SetIgnoreRandCorrectionFlag() : iDataFilePET , oImageDimensionsAndQuantification
SetIgnoreScatCorrectionFlag() : iDataFilePET , oImageDimensionsAndQuantification
SetIgnoreTOFFlag() : iDataFilePET
SetImageConvolverManager() : oAnalyticProjection , oOptimizerManager , oSensitivityGenerator , vAlgorithm , vOptimizer
SetImageDimensionsAndQuantification() : oAnalyticProjection , oDeformationManager , oDynamicDataManager , oDynamicModelManager , oImageConvolverManager , oImageProcessingManager , oImageSpace , oOptimizerManager , oProjectionLine , oProjectorManager , oSensitivityGenerator , sScannerManager , vAlgorithm , vDataFile , vDeformation , vDynamicModel , vImageConvolver , vImageProcessingModule , vOptimizer , vPenalty , vProjector , vScanner
SetImageProcessingManager() : vAlgorithm
SetImageSpace() : oAnalyticProjection , oOptimizerManager , oSensitivityGenerator , vAlgorithm , vOptimizer , vPenalty
SetImageStatFlag() : vOptimizer
SetIndex1() : oProjectionLine
SetIndex2() : oProjectionLine
SetInputFilePath() : oArterialInputCurve
SetIsotope() : iDataFilePET , iDataFileSPECT
SetKind() : iEventListCT , iEventListPET , iEventListSPECT
SetLength() : oProjectionLine
SetMask() : vProjector
SetMatchedProjectors() : oProjectionLine
SetMatriceElt() : oMatrix
SetMaxNumberOfLinesPerEvent() : iDataFilePET
SetMergeDynImagesFlag() : sOutputManager
SetMotionType() : oDeformationManager
SetMPIRank() : sOutputManager
SetMPIRankAndSize() : oImageDimensionsAndQuantification
SetMultiplicativeCorrection() : oProjectionLine
SetNbBeds() : oAnalyticProjection , oImageDimensionsAndQuantification , vAlgorithm
SetNbBins() : iDataFileSPECT
SetNbCardBasisFunctions() : oImageDimensionsAndQuantification
SetNbCardGates() : oImageDimensionsAndQuantification
SetNbCustomFLTData() : oProjectionLine , vEvent
SetNbCustomINTData() : oProjectionLine , vEvent
SetNbCustomSteps() : sChronoManager
SetNbEvents() : vDataFile
SetnbFramesToSkip() : oImageDimensionsAndQuantification
SetNbHeads() : iDataFileSPECT
SetNbIterationsAndSubsets() : vAlgorithm
SetNbLines() : vEvent
SetNbMultiModalImages() : oImageDimensionsAndQuantification
SetNbProjections() : iDataFileCT , iDataFileSPECT
SetNbRespBasisFunctions() : oImageDimensionsAndQuantification
SetNbRespGates() : oImageDimensionsAndQuantification
SetNbSkippedIterations() : vAlgorithm
SetNbThreads() : oImageDimensionsAndQuantification , sChronoManager
SetNbTimeBasisFunctions() : oImageDimensionsAndQuantification
SetNbTOFBins() : oOptimizerManager , oProjectionLine , vOptimizer
SetNbTOFResolutions() : vProjector
SetNbTOFResolutionsAndAllocateArray() : iDataFilePET
SetNbTransformations() : oDeformationManager , vDeformation
SetNbVoxX() : oImageDimensionsAndQuantification
SetNbVoxY() : oImageDimensionsAndQuantification
SetNbVoxZ() : oImageDimensionsAndQuantification
SetNormalizationFactor() : iEventNorm , iEventPET , iEventSPECT
SetNormCorrectionFlagOn() : iDataFilePET
SetNoZeroEvent() : oAnalyticProjection
SetNumberOfAtnGateImages() : oSensitivityGenerator
SetNumbersOfIterationsAndSubsets() : oOptimizerManager , vOptimizer
SetOffsetX() : oImageDimensionsAndQuantification
SetOffsetY() : oImageDimensionsAndQuantification
SetOffsetZ() : oImageDimensionsAndQuantification
SetOptimizerFOMFlag() : oOptimizerManager
SetOptimizerID() : vOptimizer
SetOptimizerImageStatFlag() : oOptimizerManager
SetOptimizerManager() : vAlgorithm
SetOptions() : oDeformationManager , oDynamicModelManager , oImageConvolverManager , oImageProcessingManager
SetOptionsBackward() : oProjectorManager
SetOptionsCommon() : oProjectorManager
SetOptionsForward() : oProjectorManager
SetOptionsOptimizer() : oOptimizerManager
SetOptionsPenalty() : oOptimizerManager
SetOutNbPrec() : sOutputManager
SetOutputIterations() : oOptimizerManager , vAlgorithm , vOptimizer
SetParametersFrom() : vDataFile
SetPathAtnImage() : oAnalyticProjection
SetPathInitImage() : oAnalyticProjection , vAlgorithm
SetPathToAttenuationImage() : oSensitivityGenerator , vAlgorithm
SetPathToMultiModalImage() : vAlgorithm
SetPathToNormalizationFileName() : oSensitivityGenerator
SetPathToSensitivityImage() : vAlgorithm
SetPenalty() : vOptimizer
SetPenaltyID() : vPenalty
SetPenaltyStrength() : vPenalty
SetPerEventTOFResolutionFlag() : iDataFilePET
SetPETIsotope() : oImageDimensionsAndQuantification
SetPETMaxAxialDiffmm() : iScannerPET , vScanner
SetPMotionFlagOn() : oDynamicDataManager , oImageDimensionsAndQuantification
SetPOI() : iEventListSPECT
SetPOI1() : iEventListPET , oProjectionLine
SetPOI2() : iEventListPET , oProjectionLine
SetPOIResolution() : oProjectionLine , vDataFile
SetProjectorManager() : oAnalyticProjection , oSensitivityGenerator , vAlgorithm
SetRandomCorrectionFlagOn() : iDataFilePET
SetRandomRate() : iEventPET
SetReadPerEventTOFResolution() : vProjector
SetRespBasisFunctions() : oImageDimensionsAndQuantification
SetRespBasisFunctionsFile() : oImageDimensionsAndQuantification
SetRespMotionFlagOn() : oDynamicDataManager , oImageDimensionsAndQuantification
SetRespStaticFlag() : oImageDimensionsAndQuantification
SetRotationMatrix() : iDeformationRigid
SetRotDirection() : vScanner
SetSaveDynamicBasisCoefficientImages() : vAlgorithm
SetSaveLUTFlag() : sScannerManager
SetSaveSensitivityHistoFlag() : vAlgorithm
SetSaveSubsetImageFlag() : vAlgorithm
SetScanner() : oAnalyticProjection , oProjectorManager , oSensitivityGenerator , vProjector
SetScatterCorrectionFlagOn() : iDataFilePET , iDataFileSPECT
SetScatterRate() : iEventCT , iEventHistoPET , iEventListPET , iEventPET , iEventSPECT
SetSensitivityMode() : vProjector
SetSensitivityModeOff() : oProjectorManager
SetSensitivityModeOn() : oProjectorManager
SetSpecificParametersFrom() : iDataFileCT , iDataFilePET , iDataFileSPECT , vDataFile
SetSPECTIsotope() : oImageDimensionsAndQuantification
SetStartTime() : vDataFile
SetThreadNumber() : oProjectionLine
SetTimeBasisFunctions() : oImageDimensionsAndQuantification
SetTimeInMs() : vEvent
SetTimeStaticFlag() : oImageDimensionsAndQuantification
SetTOFBinSizeInMm() : vProjector
SetTOFEventResolutionFlag() : iDataFilePET , vProjector
SetTOFEventResolutionInPs() : iEventListPET
SetTOFInfoFlag() : iDataFilePET
SetTOFMeasurementInPs() : iEventListPET , oProjectionLine
SetTOFMeasurementRangeInMm() : vProjector
SetTOFMeasurementRangeInPs() : iDataFilePET , iEventListPET
SetTOFOffsetInMm() : vProjector
SetTOFOffsetPs() : iDataFilePET
SetTOFProbabilities() : iDataFilePET , vProjector
SetTOFResolutionInMm() : vProjector
SetTOFResolutionInPs() : iDataFilePET
SetTOFSigmaInPs() : oProjectionLine
SetUseModelInReconstruction() : oDynamicModelManager , vDynamicModel
SetVerbose() : oAnalyticProjection , oArterialInputCurve , oComputeProjection , oDeformationManager , oDynamicDataManager , oDynamicModelManager , oImageConvolverManager , oImageDimensionsAndQuantification , oImageProcessingManager , oImageSpace , oOptimizerManager , oProjectionLine , oProjectorManager , oSensitivityGenerator , sChronoManager , sOutputManager , sRandomNumberGenerator , sScannerManager , vAlgorithm , vDataFile , vDeformation , vDynamicModel , vEvent , vImageConvolver , vImageProcessingModule , vOptimizer , vPenalty , vProjector , vScanner
SetVoxSizeX() : oImageDimensionsAndQuantification
SetVoxSizeY() : oImageDimensionsAndQuantification
SetVoxSizeZ() : oImageDimensionsAndQuantification
SetXRotMtx() : oMatrix
SetYRotMtx() : oMatrix
SetZRotMtx() : oMatrix
ShowBasisFunctions() : iLinearModel
ShowCommonHelp() : oImageConvolverManager , oImageProcessingManager , vProjector
ShowHelp() : iDeformationRigid , iDeformationTemplate , iImageConvolverStationaryGaussian , iImageConvolverStationaryIsotropicGaussian , iImageConvolverTemplate , iImageProcessingTemplate , iScannerCT , iScannerPET , iScannerSPECTConv , vDeformation , vDynamicModel , vImageConvolver , vImageProcessingModule , vOptimizer , vPenalty , vProjector , vScanner
ShowHelpDeformation() : sAddonManager
ShowHelpDynamicModel() : sAddonManager
ShowHelpImageConvolver() : sAddonManager
ShowHelpImageProcessingModule() : sAddonManager
ShowHelpModelSpecific() : i1TCModel , iDynamicModelTemplate , iLinearModel , iLinearModelTemplate , iLinearPatlakModel , iLinearSpectralModel , vDynamicModel
ShowHelpOptimizer() : sAddonManager
ShowHelpPenalty() : sAddonManager
ShowHelpProjector() : sAddonManager
ShowHelpScanner() : sAddonManager
ShowHelpSpecific() : iOptimizerADMMLim , iOptimizerAPPGML , iOptimizerBSREM , iOptimizerLandweber , iOptimizerMLEM , iOptimizerMLMuMap , iOptimizerMLTR , iOptimizerModifiedEMForMRFPenalizedML , iOptimizerNEGML , iOptimizerOneStepLate , iOptimizerOriginalAML , iOptimizerPenalizedPreconditionedGradientML , iOptimizerSens , iOptimizerTemplate , iPenaltyMarkovRandomField , iPenaltyMedianRootPrior , iPenaltyQuadratic , iPenaltyTemplate , iProjectorClassicSiddon , iProjectorDistanceDriven , iProjectorIncrementalSiddon , iProjectorIncrementalSiddonMulti , iProjectorJoseph , iProjectorTemplate , iRCPGSAlgorithm , vAlgorithm , vOptimizer , vPenalty , vProjector
ShowScannersDescription() : sScannerManager
Shuffle() : vDataFile
size() : oMemoryMapped
sOutputManager() : sOutputManager
sRandomNumberGenerator() : sRandomNumberGenerator
sScannerManager() : sScannerManager
StartConvolution() : sChronoManager
StartCustomStep() : sChronoManager
StartIterativeDataUpdateStep1() : sChronoManager
StartIterativeDataUpdateStep2() : sChronoManager
StartIterativeDataUpdateStep3() : sChronoManager
StartIterativeDataUpdateStep4() : sChronoManager
StepAfterIterationLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepAfterSubsetLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepBeforeIterationLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepBeforeSubsetLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepImageOutput() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepInnerLoopInsideSubsetLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepPostProcessInsideSubsetLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StepPreProcessInsideSubsetLoop() : iIterativeAlgorithm , iRCPGSAlgorithm , vAlgorithm
StopConvolution() : sChronoManager
StopCustomStep() : sChronoManager
StopIterativeDataUpdateStep1() : sChronoManager
StopIterativeDataUpdateStep2() : sChronoManager
StopIterativeDataUpdateStep3() : sChronoManager
StopIterativeDataUpdateStep4() : sChronoManager