oDynamicModelManager Class Reference

This class is designed to manage the use of dynamic model in the reconstruction. More...

#include <oDynamicModelManager.hh>

Collaboration diagram for oDynamicModelManager:

Public Member Functions
	oDynamicModelManager ()
	Constructor of oDynamicModelManager. Simply set all data members to default values. More...
	~oDynamicModelManager ()
	Destructor of oDynamicModelManager. Free memory from all allocated tabs. More...
int	CheckParameters ()
	This function is used to check parameters after the latter have been all set using Set functions. More...
int	Initialize ()
	Set the dynamic model flag and instanciate/initialize model objects through the ParseOptionsAndInitializeDeformations() private function. More...
int	ApplyDynamicModel (oImageSpace *ap_ImageS, int a_iteration, int a_subset)
int	SaveParametricImages (int a_iteration, int a_subset=-1)
void	SetVerbose (int a_verboseLevel)
void	SetImageDimensionsAndQuantification (oImageDimensionsAndQuantification *ap_ImageDimensionsAndQuantification)
void	SetOptions (const string &a_options)
bool	GetUseModel ()
	Indicate if the use of a dynamic model is enabled. More...
void	SetUseModelInReconstruction (bool a_useModelInReconstruction)
int	SetDiagonalTimeBasisFunctions ()
	Set diagonal Time Basis Functions for regular frame-by-frame reconstruction. More...
int	SetDiagonalRespBasisFunctions ()
	Set diagonal Respiratory Basis Functions for regular gated reconstruction. More...
int	SetDiagonalCardBasisFunctions ()
	Set diagonal Cardiac Basis Functions for regular gated reconstruction. More...
	oDynamicModelManager ()
	~oDynamicModelManager ()
int	CheckParameters ()
int	Initialize ()
int	ApplyDynamicModel (oImageSpace *ap_ImageS, int a_iteration, int a_subset)
int	SaveParametricImages (int a_iteration, int a_subset=-1)
void	SetVerbose (int a_verboseLevel)
void	SetImageDimensionsAndQuantification (oImageDimensionsAndQuantification *ap_ImageDimensionsAndQuantification)
void	SetOptions (const string &a_options)
bool	GetUseModel ()
void	SetUseModelInReconstruction (bool a_useModelInReconstruction)
int	SetDiagonalTimeBasisFunctions ()
int	SetDiagonalRespBasisFunctions ()
int	SetDiagonalCardBasisFunctions ()

Private Member Functions
int	ParseOptionsAndInitializeModel ()
	Parse dynamic model options contained in the previously provided strings. This function is called inside the Initialize() function. More...
int	ParseOptionsAndInitializeModel ()

Private Attributes
oImageDimensionsAndQuantification *	mp_ID
string	m_options
vDynamicModel *	mp_DynamicModel
int	m_nbTimeBasisFunctions
int	m_nbRespBasisFunctions
int	m_nbCardBasisFunctions
FLTNB **	m2p_timeBasisFunctions
FLTNB **	m2p_respBasisFunctions
FLTNB **	m2p_cardBasisFunctions
bool	m_useModel
bool	m_useModelInReconstruction
int	m_verbose
bool	m_checked
bool	m_initialized

Detailed Description

This class is designed to manage the use of dynamic model in the reconstruction.

As each manager class, it is created in the main program, all parameters are then set, checked, and the manager is initialized.
The manager is then used by the algorithm itself, where the function ApplyDynamicModel() is called at the end of the subset loop

Definition at line 23 of file code/include/dynamic/oDynamicModelManager.hh.

Constructor & Destructor Documentation

oDynamicModelManager() [1/2]

oDynamicModelManager::oDynamicModelManager

(

)

Constructor of oDynamicModelManager. Simply set all data members to default values.

Definition at line 19 of file code/src/dynamic/oDynamicModelManager.cc.

~oDynamicModelManager() [1/2]

oDynamicModelManager::~oDynamicModelManager

(

)

Destructor of oDynamicModelManager. Free memory from all allocated tabs.

Definition at line 54 of file code/src/dynamic/oDynamicModelManager.cc.

oDynamicModelManager() [2/2]

oDynamicModelManager::oDynamicModelManager

(

)

~oDynamicModelManager() [2/2]

oDynamicModelManager::~oDynamicModelManager

(

)

Member Function Documentation

ApplyDynamicModel() [1/2]

int oDynamicModelManager::ApplyDynamicModel	(	oImageSpace *	ap_ImageS,
		int	a_iteration,
		int	a_subset
	)

Definition at line 313 of file code/src/dynamic/oDynamicModelManager.cc.

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ApplyDynamicModel() [2/2]

int oDynamicModelManager::ApplyDynamicModel	(	oImageSpace *	ap_ImageS,
		int	a_iteration,
		int	a_subset
	)

CheckParameters() [1/2]

int oDynamicModelManager::CheckParameters

(

)

This function is used to check parameters after the latter have been all set using Set functions.

Returns

0 if success, positive value otherwise.

Definition at line 70 of file code/src/dynamic/oDynamicModelManager.cc.

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CheckParameters() [2/2]

int oDynamicModelManager::CheckParameters

(

)

GetUseModel() [1/2]

oDynamicModelManager::GetUseModel ( )

inline

Indicate if the use of a dynamic model is enabled.

Returns

true if enabled, false otherwise

Definition at line 112 of file code/include/dynamic/oDynamicModelManager.hh.

GetUseModel() [2/2]

bool oDynamicModelManager::GetUseModel ( )

inline

Definition at line 112 of file include/dynamic/oDynamicModelManager.hh.

Initialize() [1/2]

int oDynamicModelManager::Initialize

(

)

Set the dynamic model flag and instanciate/initialize model objects through the ParseOptionsAndInitializeDeformations() private function.

Returns

0 if success, positive value otherwise.

Definition at line 108 of file code/src/dynamic/oDynamicModelManager.cc.

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Initialize() [2/2]

int oDynamicModelManager::Initialize

(

)

ParseOptionsAndInitializeModel() [1/2]

int oDynamicModelManager::ParseOptionsAndInitializeModel ( )

private

Parse dynamic model options contained in the previously provided strings. This function is called inside the Initialize() function.

Manage the options reading and initialize specific vDynamicModel
Options are a string containing first the name of the model, then either a ':' and a configuration file specific to the model

• or - as many ',' as needed parameters for this model.
  Specific pure virtual functions of the vDynamicModel are used to read parameters and initialize them.

  Returns

  0 if success, positive value otherwise

Definition at line 165 of file code/src/dynamic/oDynamicModelManager.cc.

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ParseOptionsAndInitializeModel() [2/2]

int oDynamicModelManager::ParseOptionsAndInitializeModel ( )

private

SaveParametricImages() [1/2]

int oDynamicModelManager::SaveParametricImages	(	int	a_iteration,
		int	a_subset = -1
	)

Definition at line 358 of file code/src/dynamic/oDynamicModelManager.cc.

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SaveParametricImages() [2/2]

int oDynamicModelManager::SaveParametricImages	(	int	a_iteration,
		int	a_subset = -1
	)

SetDiagonalCardBasisFunctions() [1/2]

int oDynamicModelManager::SetDiagonalCardBasisFunctions

(

)

Set diagonal Cardiac Basis Functions for regular gated reconstruction.

Returns

true if enabled, false otherwise

Definition at line 432 of file code/src/dynamic/oDynamicModelManager.cc.

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SetDiagonalCardBasisFunctions() [2/2]

int oDynamicModelManager::SetDiagonalCardBasisFunctions

(

)

SetDiagonalRespBasisFunctions() [1/2]

int oDynamicModelManager::SetDiagonalRespBasisFunctions

(

)

Set diagonal Respiratory Basis Functions for regular gated reconstruction.

Returns

true if enabled, false otherwise

Definition at line 407 of file code/src/dynamic/oDynamicModelManager.cc.

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SetDiagonalRespBasisFunctions() [2/2]

int oDynamicModelManager::SetDiagonalRespBasisFunctions

(

)

SetDiagonalTimeBasisFunctions() [1/2]

int oDynamicModelManager::SetDiagonalTimeBasisFunctions

(

)

SetDiagonalTimeBasisFunctions() [2/2]

int oDynamicModelManager::SetDiagonalTimeBasisFunctions

(

)

Set diagonal Time Basis Functions for regular frame-by-frame reconstruction.

Returns

true if enabled, false otherwise

Definition at line 385 of file code/src/dynamic/oDynamicModelManager.cc.

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SetImageDimensionsAndQuantification() [1/2]

void oDynamicModelManager::SetImageDimensionsAndQuantification ( oImageDimensionsAndQuantification *  ap_ImageDimensionsAndQuantification )

inline

Definition at line 98 of file include/dynamic/oDynamicModelManager.hh.

SetImageDimensionsAndQuantification() [2/2]

void oDynamicModelManager::SetImageDimensionsAndQuantification ( oImageDimensionsAndQuantification *  ap_ImageDimensionsAndQuantification )

inline

Definition at line 98 of file code/include/dynamic/oDynamicModelManager.hh.

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SetOptions() [1/2]

void oDynamicModelManager::SetOptions ( const string &  a_options )

inline

Definition at line 105 of file include/dynamic/oDynamicModelManager.hh.

SetOptions() [2/2]

void oDynamicModelManager::SetOptions ( const string &  a_options )

inline

Definition at line 105 of file code/include/dynamic/oDynamicModelManager.hh.

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SetUseModelInReconstruction() [1/2]

void oDynamicModelManager::SetUseModelInReconstruction ( bool  a_useModelInReconstruction )

inline

Definition at line 120 of file include/dynamic/oDynamicModelManager.hh.

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SetUseModelInReconstruction() [2/2]

void oDynamicModelManager::SetUseModelInReconstruction ( bool  a_useModelInReconstruction )

inline

Definition at line 120 of file code/include/dynamic/oDynamicModelManager.hh.

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SetVerbose() [1/2]

void oDynamicModelManager::SetVerbose ( int  a_verboseLevel )

inline

Definition at line 91 of file code/include/dynamic/oDynamicModelManager.hh.

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SetVerbose() [2/2]

void oDynamicModelManager::SetVerbose ( int  a_verboseLevel )

inline

Definition at line 91 of file include/dynamic/oDynamicModelManager.hh.

Member Data Documentation

m2p_cardBasisFunctions

FLTNB ** oDynamicModelManager::m2p_cardBasisFunctions

private

The table of cardiac basis functions coefficients

Definition at line 171 of file code/include/dynamic/oDynamicModelManager.hh.

m2p_respBasisFunctions

FLTNB ** oDynamicModelManager::m2p_respBasisFunctions

private

The table of respiratory basis functions coefficients

Definition at line 170 of file code/include/dynamic/oDynamicModelManager.hh.

m2p_timeBasisFunctions

FLTNB ** oDynamicModelManager::m2p_timeBasisFunctions

private

The table of time basis functions coefficients

Definition at line 169 of file code/include/dynamic/oDynamicModelManager.hh.

m_checked

bool oDynamicModelManager::m_checked

private

Boolean indicating whether the parameters were checked or not

Definition at line 177 of file code/include/dynamic/oDynamicModelManager.hh.

m_initialized

bool oDynamicModelManager::m_initialized

private

Boolean indicating whether the manager was initialized or not

Definition at line 178 of file code/include/dynamic/oDynamicModelManager.hh.

m_nbCardBasisFunctions

int oDynamicModelManager::m_nbCardBasisFunctions

private

Number of Cardiac Basis Functions

Definition at line 168 of file code/include/dynamic/oDynamicModelManager.hh.

m_nbRespBasisFunctions

int oDynamicModelManager::m_nbRespBasisFunctions

private

Number of Respiratory Basis Functions

Definition at line 167 of file code/include/dynamic/oDynamicModelManager.hh.

m_nbTimeBasisFunctions

int oDynamicModelManager::m_nbTimeBasisFunctions

private

Number of Time Basis Functions

Definition at line 166 of file code/include/dynamic/oDynamicModelManager.hh.

m_options

string oDynamicModelManager::m_options

private

The string containing options for the dynamic model

Definition at line 163 of file code/include/dynamic/oDynamicModelManager.hh.

m_useModel

bool oDynamicModelManager::m_useModel

private

Flag indicating that use of a dynamic model is enabled or not

Definition at line 174 of file code/include/dynamic/oDynamicModelManager.hh.

m_useModelInReconstruction

bool oDynamicModelManager::m_useModelInReconstruction

private

Flag indicating if the model is used with castor-recon or with imageDynamicTools

Definition at line 175 of file code/include/dynamic/oDynamicModelManager.hh.

m_verbose

int oDynamicModelManager::m_verbose

private

The verbose level

Definition at line 176 of file code/include/dynamic/oDynamicModelManager.hh.

mp_DynamicModel

vDynamicModel * oDynamicModelManager::mp_DynamicModel

private

Dynamic model object

Definition at line 164 of file code/include/dynamic/oDynamicModelManager.hh.

mp_ID

oImageDimensionsAndQuantification * oDynamicModelManager::mp_ID

private

Pointer to the oImageDimensionsAndQuantification object in use

Definition at line 162 of file code/include/dynamic/oDynamicModelManager.hh.

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The documentation for this class was generated from the following files:

• code/include/dynamic/oDynamicModelManager.hh
• code/src/dynamic/oDynamicModelManager.cc