 |
CASToR
1.1
Tomographic Reconstruction (PET/SPECT)
|
  _WDIR | |
| _wdirent | |
| DIR | |
| dirent | |
| Intf_fields | Interfile fields. This structure contains all the Interfile keys currently managed by CASToR Declared in oInterfileIO.hh |
| Intf_key | Interfile key elements. This structure is used to recover and process the elements of an Interfile key ( key := value #anycomment) Declared in oInterfileIO.hh |
| oAnalyticProjection | This class manages the analytic projection of an image and the computation of the associated datafile. |
| oComputeProjection | Class that manages the data update step of analytic projection |
| oDeformationManager | This class is designed to manage the image-based deformation part of the reconstruction |
| oDynamicDataManager | This class gathers the information about the dynamic splitting of the data |
| oDynamicModelManager | This class is designed to manage the use of dynamic model in the reconstruction |
| oImageConvolverManager | This class is designed to manage the different image convolvers and to apply them |
| oImageDimensionsAndQuantification | This class is designed to manage all dimensions and quantification related stuff |
| oImageProcessingManager | This class is designed to manage the different image processing modules and to apply them |
| oImageSpace | This class holds all the matrices in the image domain that can be used in the algorithm: image, forward-image, correction, additional image, sensitivity image |
| oIterativeAlgorithm | This is the main class for iterative reconstructions, that manages the iteration loops. This class manages an iterative reconstruction of any kind, using a vDataFile, and through the use of an oProjector, an oOptimizer, a oConvolver, a oImageSpace |
| oMatrix | Structure designed for basic matrices operations |
| oOptimizerManager | This class is designed to manage the optimization part of an iterative reconstruction |
| oProjectionLine | This class is designed to manage and store system matrix elements associated to a vEvent |
| oProjectorManager | This class is designed to manage the projection part of the reconstruction |
| oSensitivityGenerator | This class is designed to manage the computation of the sensitivity image |
| oSystemMatrix | This class is designed to manage pre-computed system matrices |
| sAddonManager | This class is designed to manage the automatic declaration of 'addon' classes |
| sOutputManager | Singleton class that manages output writing on disk (images, sinograms, etc). It also manages logging and printing on screen |
| sRandomNumberGenerator | Singleton class that generate a thread-safe random generator number for openMP As singleton, it can be called from any class requiring RNGs |
| sScannerManager | Singleton class that Instantiate and initialize the scanner object |
 vDataFile | This class is designed to be a mother virtual class for Datafile |
 iDataFilePET | Inherit from vDataFile. Class that manages the reading of a PET input file (header + data) |
| iDataFileSPECT | Inherit from vDataFile. Class that manages the reading of a SPECT input file (header + data) |
 iDataFileTransmission | Inherit from vDataFile |
| vDeformation | This is the mother class of image-based transformation class |
| iDeformationTemplate | This class is a child of the vDeformation class implementing a template squeleton |
| vDynamicModel | This is the mother class of dynamic model classes |
| iDynamicModelTemplate | This class is a child of the vDynamicModel class implementing a template squeleton |
| iPatlakModel | This class implements the Patlak model, to model kinetics of irreversible radiotracers |
| vEvent | Mother class for the Event objects |
| iEventNorm | Inherit from vEvent. Used for normalization events for sensitivity computation |
| iEventPET | Inherit from vEvent. Main PET class for the Event objects |
| iEventHistoPET | Inherit from iEventPET. Class for PET histogram mode events |
| iEventListPET | Inherit from iEventPET. Class for PET list-mode events |
| iEventSPECT | Inherit from vEvent. Main SPECT class for the Event objects |
| iEventHistoSPECT | Inherit from iEventSPECT. Class for SPECT histogram mode events |
| iEventListSPECT | Inherit from iEventSPECT. Class for SPECT list-mode events |
| iEventTransmission | Inherit from vEvent |
| vImageConvolver | This abstract class is the generic image convolver class used by the oImageConvolverManager |
| iImageConvolverStationaryGaussian | This class is an image convolver module implementing stationary gaussian filtering |
| iImageConvolverTemplate | This class is a template of an image convolver module to serve as an example |
| vImageProcessingModule | This abstract class is the generic image processing module class used by the oImageProcessingManager |
| iImageProcessingTemplate | This class is a template of an image processing module to serve as an example |
| vOptimizer | This class is designed to generically described any iterative optimizer |
| iOptimizerLandweber | This class implements the Landweber algorithm |
| iOptimizerMLEM | This class implements the Maximum Likelihood Expectation Maximization algorithm |
| iOptimizerNEGML | This class implements the NEGML algorithm |
| iOptimizerOriginalAML | This class implements the original AML algorithm (AB-EMML with B to infinity) |
| iOptimizerTemplate | This class is a child of the vOptimizer class implementing a template squeleton |
| vPenalty | This class is designed to generically described any penalty applied to MAP algorithms |
| vProjector | This class is designed to generically described any on-the-fly projector |
| iProjectorClassicSiddon | This class is a child of the vProjector class implementing the classic Siddon ray tracer |
| iProjectorIncrementalSiddon | This class is a child of the vProjector class implementing the incremental Siddon ray tracer |
| iProjectorIncrementalSiddonMulti | This class is a child of the vProjector class implementing the multi incremental Siddon ray tracer |
| iProjectorIRIS | This class is a child of the vProjector class implementing the IRIS projector |
| iProjectorJoseph | This class is a child of the vProjector class implementing the Joseph ray tracer |
| iProjectorTemplate | This class is a child of the vProjector class implementing a template squeleton |
 vScanner | Generic class for scanner objects |
 iScannerPET | This class is used to represent any cylindrical PET scanner |
| iScannerSPECTConv | This class is used to represent any SPECT camera with parallel/convergent collimator |
1.8.6
