CASToR
2.0
Tomographic Reconstruction (PET/SPECT/CT)
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This class is a child of the vProjector class implementing the Joseph ray tracer. More...
#include <iProjectorJoseph.hh>
Public Member Functions | |
iProjectorJoseph () | |
The constructor of iProjectorJoseph. More... | |
~iProjectorJoseph () | |
The destructor of iProjectorJoseph. More... | |
int | ReadConfigurationFile (const string &a_configurationFile) |
A function used to read options from a configuration file. More... | |
int | ReadOptionsList (const string &a_optionsList) |
A function used to read options from a list of options. More... | |
INTNB | EstimateMaxNumberOfVoxelsPerLine () |
This function is used to compute and provide an estimate of the maximum number of voxels that could contribute to a projected line. More... | |
Public Member Functions inherited from vProjector | |
vProjector () | |
The constructor of vProjector. More... | |
virtual | ~vProjector () |
The destructor of vProjector. More... | |
void | ShowHelp () |
A function used to show help about the projector. More... | |
int | ReadCommonOptionsList (const string &a_optionsList) |
This function is used to read options common to all projectors given as a string. More... | |
int | CheckParameters () |
A public function used to check the parameters settings. More... | |
int | Initialize () |
A public function used to initialize the projector. More... | |
int | Project (int a_direction, oProjectionLine *ap_ProjectionLine, uint32_t *ap_index1, uint32_t *ap_index2, int a_nbIndices) |
A function use to computed the projection elements with respect to the provided parameters. More... | |
void | SetVerbose (int a_verbose) |
Set the verbose level. More... | |
void | SetScanner (vScanner *ap_Scanner) |
Set the pointer to the scanner in use. More... | |
void | SetSensitivityMode (bool a_sensitivityMode) |
Set the sensitivity mode on or off. More... | |
void | SetApplyTOF (int a_applyTOF) |
Set the TOF mode. More... | |
void | SetApplyPOI (bool a_applyPOI) |
Set the POI mode. More... | |
int | SetImageDimensionsAndQuantification (oImageDimensionsAndQuantification *ap_ImageDimensionsAndQuantification) |
Set the pointer to the image dimensions in use and copy locally some often use variables. More... | |
bool | GetCompatibilityWithSPECTAttenuationCorrection () |
bool | GetCompatibilityWithCompression () |
void | SetMask (bool *ap_mask) |
Set a mask for voxels. More... | |
Private Member Functions | |
void | ShowHelpSpecific () |
A function used to show help about the child module. More... | |
int | CheckSpecificParameters () |
A private function used to check the parameters settings specific to the child projector. More... | |
int | InitializeSpecific () |
This function is used to initialize specific stuff to the child projector. More... | |
int | ProjectWithoutTOF (int a_direction, oProjectionLine *ap_ProjectionLine) |
A function to project without TOF. More... | |
int | ProjectWithTOFPos (int a_direction, oProjectionLine *ap_ProjectionLine) |
A function to project with TOF continuous information. More... | |
int | ProjectWithTOFBin (int a_direction, oProjectionLine *ap_ProjectionLine) |
A function to project with TOF binned information. More... | |
Private Attributes | |
HPFLTNB * | mp_boundariesX |
HPFLTNB * | mp_boundariesY |
HPFLTNB * | mp_boundariesZ |
uint8_t * | mp_maskPad |
HPFLTNB | m_toleranceX |
HPFLTNB | m_toleranceY |
HPFLTNB | m_toleranceZ |
HPFLTNB | m_boundX |
HPFLTNB | m_boundY |
HPFLTNB | m_boundZ |
Additional Inherited Members | |
Static Public Member Functions inherited from vProjector | |
static void | ShowCommonHelp () |
This function is used to print out some help about the use of options common to all projectors. It is static because it is called in main without instantiating an object. More... | |
Protected Attributes inherited from vProjector | |
FLTNB | mp_sizeVox [3] |
INTNB | mp_nbVox [3] |
INTNB | m_nbVoxXY |
FLTNB | mp_halfFOV [3] |
oImageDimensionsAndQuantification * | mp_ImageDimensionsAndQuantification |
vScanner * | mp_Scanner |
int | m_applyTOF |
FLTNB | m_TOFnbSigmas |
bool | m_applyPOI |
bool | m_sensitivityMode |
bool | m_compatibleWithSPECTAttenuationCorrection |
bool | m_compatibleWithCompression |
int | m_verbose |
bool | m_checked |
bool | m_initialized |
bool * | mp_mask |
bool | m_hasMask |
This class is a child of the vProjector class implementing the Joseph ray tracer.
This class implements the Joseph algorithm which is a ray-tracer using bi-linear interpolations. Reference: P. M. Joseph, "An improved algorithm for reprojecting rays through pixel images", IEEE Trans. Med. Imaging, vol. 1, pp. 192-6, 1982.
Definition at line 45 of file iProjectorJoseph.hh.
iProjectorJoseph::iProjectorJoseph | ( | ) |
The constructor of iProjectorJoseph.
This is the default and unique constructor. It does not take any parameter and its role is only to affect default values to each member of the class.
Definition at line 47 of file iProjectorJoseph.cc.
iProjectorJoseph::~iProjectorJoseph | ( | ) |
The destructor of iProjectorJoseph.
This is the default and unique destructor. It does not take any parameter and its role is only to free or delete all structures that were built by this class.
Definition at line 71 of file iProjectorJoseph.cc.
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privatevirtual |
A private function used to check the parameters settings specific to the child projector.
This function is used to check that all parameters specific to the projector are correctly set within allowed values. It is called by the CheckParameters() function of the mother class. It is the implementation of the pure virtual function inherited from the abstract mother class vProjector.
Implements vProjector.
Definition at line 141 of file iProjectorJoseph.cc.
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virtual |
This function is used to compute and provide an estimate of the maximum number of voxels that could contribute to a projected line.
This function is an overloaded implementation of the virtual mother function. It is used to compute and provide an estimate of the maximum number of voxels that could contribute to a projected line.
Reimplemented from vProjector.
Definition at line 202 of file iProjectorJoseph.cc.
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privatevirtual |
This function is used to initialize specific stuff to the child projector.
It is called by the public Initialize() function from the mother.
Implements vProjector.
Definition at line 154 of file iProjectorJoseph.cc.
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privatevirtual |
A function to project without TOF.
int | a_direction |
oProjectionLine* | ap_ProjectionLine |
Projects the provided line following the provided direction, without TOF. It fills the provided oProjectionLine. It is an implementation of the pure virtual function from the mother class.
Implements vProjector.
Definition at line 219 of file iProjectorJoseph.cc.
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privatevirtual |
A function to project with TOF binned information.
int | a_direction |
oProjectionLine* | ap_ProjectionLine |
Projects the provided line following the provided direction, with TOF information describe as a histogram bin. It fills the provided oProjectionLine. It is an implementation of the pure virtual function from the mother class.
Implements vProjector.
Definition at line 896 of file iProjectorJoseph.cc.
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privatevirtual |
A function to project with TOF continuous information.
int | a_direction |
oProjectionLine* | ap_ProjectionLine |
Projects the provided line following the provided direction, with TOF described as a continuous measurement. It fills the provided oProjectionLine. It is an implementation of the pure virtual function from the mother class.
Implements vProjector.
Definition at line 521 of file iProjectorJoseph.cc.
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virtual |
A function used to read options from a configuration file.
const | string& a_configurationFile |
This function implements the reading of all options associated to the child projector, from a configuration file. It is the implementation of the pure virtual function inherited from the abstract class vProjector. It checks the reading status but not the options values that will be checked by the CheckSpecificParameters() function.
Implements vProjector.
Definition at line 103 of file iProjectorJoseph.cc.
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virtual |
A function used to read options from a list of options.
const | string& a_configurationFile |
This function implements the reading of all options associated to the child projector, from a list of options. It is the implementation of the pure virtual function inherited from the abstract class vProjector. It checks the reading status but not the options values that will be checked by the CheckSpecificParameters() function.
Implements vProjector.
Definition at line 116 of file iProjectorJoseph.cc.
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privatevirtual |
A function used to show help about the child module.
This function must describe what the projector does and how to use it. It describes in details the different parameters of the projector, and how to set them through the use of a configuration file or a list of options. It is pure virtual so is implemented by children. It is private because called by the public ShowHelp() function.
Implements vProjector.
Definition at line 129 of file iProjectorJoseph.cc.
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private |
Limit bound for X-axis
Definition at line 181 of file iProjectorJoseph.hh.
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Limit bound for Y-axis
Definition at line 182 of file iProjectorJoseph.hh.
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Limit bound for Z-axis
Definition at line 183 of file iProjectorJoseph.hh.
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Tolerance to avoid error on boundaries, for X axis
Definition at line 178 of file iProjectorJoseph.hh.
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Tolerance to avoid error on boundaries, for Y axis
Definition at line 179 of file iProjectorJoseph.hh.
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Tolerance to avoid error on boundaries, for Z axis
Definition at line 180 of file iProjectorJoseph.hh.
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private |
Boundaries for X axis
Definition at line 171 of file iProjectorJoseph.hh.
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private |
Boundaries for Y axis
Definition at line 172 of file iProjectorJoseph.hh.
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private |
Boundaries for Z axis
Definition at line 173 of file iProjectorJoseph.hh.
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private |
Mask for the padded image space
Definition at line 174 of file iProjectorJoseph.hh.