oDeformationManager.hh

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#ifndef ODEFORMATIONMANAGER_HH
#define ODEFORMATIONMANAGER_HH 1

#include "gVariables.hh"
#include "vDeformation.hh"
#include "vDataFile.hh"

// =====================================================================
// ---------------------------------------------------------------------
// ---------------------------------------------------------------------
// =====================================================================
#define DEF_RESP_MOT 0

#define DEF_CARD_MOT 1

#define DEF_IPAT_MOT 2

class vDataFile;



class oDeformationManager
{
  // Constructor & Destructor
  public:
    oDeformationManager();
    
    ~oDeformationManager();


  // -------------------------------------------------------------------
  // Public member functions
  public:
    int CheckParameters();
    int Initialize();
    void InstantiateImageForDeformation(oImageSpace* ap_Image);
    void DeallocateImageForDeformation(oImageSpace* ap_Image);
    void InitImageForDeformation(oImageSpace* ap_Image);


  // -------------------------------------------------------------------
  // Public Get & Set functions
  public:
    inline void SetVerbose(int a_verboseLevel)
           {m_verbose = a_verboseLevel;}
    inline void SetDataMode(int a_dataMode)
           {m_dataMode = a_dataMode;}
    inline void SetImageDimensionsAndQuantification(oImageDimensionsAndQuantification* ap_ImageDimensionsAndQuantification) 
                                                   {mp_ID = ap_ImageDimensionsAndQuantification;}
    inline void SetOptionsResp(const string& a_optionsResp, int a_nbGates) 
           {m_optionsResp = a_optionsResp; m_nbRespGates = a_nbGates;}
    inline void SetOptionsCard(const string& a_optionsCard, int a_nbGates)
           {m_optionsCard = a_optionsCard; m_nbCardGates = a_nbGates;}
    inline void SetOptionsInv(const string& a_optionsInv) 
           {m_optionsInv = a_optionsInv;}
    inline bool UseDeformationResp()
           {return m_UseDeformationResp;}
    inline bool UseDeformationCard()
           {return m_UseDeformationCard;}
    inline bool UseDeformationInv()
           {return m_UseDeformationInv;}
    inline int GetNbSensImagesRespDeformation(int a_value) 
           {if (UseDeformationResp()) return 0; else return a_value;}
    inline int GetNbSensImagesCardDeformation(int a_value) 
           {if (UseDeformationCard()) return 0; else return a_value;}


  // -------------------------------------------------------------------
    // Deformation functions
    int ApplyDeformationForSensitivityGeneration(oImageSpace* ap_Image, int a_defDirection, int a_defType, int fr, int rg, int cg);
    int ApplyDeformationsToForwardImage(oImageSpace* ap_Image);
    int ApplyDeformationsToBackwardImage(oImageSpace* ap_Image);
    int PerformDeformation(oImageSpace* ap_Image);


  // -------------------------------------------------------------------
  // Private member functions
  private:
    int ParseOptionsAndInitializeDeformations();


  // -------------------------------------------------------------------
  // Data members
  private:
    // Image dimensions
    oImageDimensionsAndQuantification* mp_ID; 
    // Options for each deformation type
    string m_optionsResp;                     
    string m_optionsCard;                     
    string m_optionsInv;                      
    // Deformation objects and associated bool
    vDeformation* mp_DeformationResp;          // TODO Mix the two gating motion together as physiological motion ? 
    vDeformation* mp_DeformationCard;         
    vDeformation* mp_DeformationInv;          
    bool m_UseDeformationResp;                
    bool m_UseDeformationCard;                
    bool m_UseDeformationInv;                 
    // Variable indicating the current gate for the different types of motion
    int m_currentRespGate;                    
    int m_currentCardGate;                    
    int m_currentPMotionIndex;                
    // Number of gates for cyclic motion
    int m_nbRespGates;                        
    int m_nbCardGates;                        
    // Verbose level
    int m_verbose;                            
    // Data mode
    int m_dataMode;                           
    // Has been checked ?
    bool m_checked;                           
    // Has been initialized ?
    bool m_initialized;                       
};

#endif