iPatlakModel.hh

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#ifndef IPATLAKMODEL_HH
#define IPATLAKMODEL_HH 1

#include "vDynamicModel.hh"
#include "sAddonManager.hh"



class iPatlakModel : public vDynamicModel
{
  // -----------------------------------------------------------------------------------------
  // Constructor & Destructor
  public:
    iPatlakModel();
    ~iPatlakModel();


  // -----------------------------------------------------------------------------------------
  // Public member functions related to the initialization of the model
  public:
    // Function for automatic insertion (put the class name as the parameters and do not add semi-colon at the end of the line)
    FUNCTION_DYNAMICMODEL(iPatlakModel)
    int CheckSpecificParameters();
    int ReadAndCheckConfigurationFile(string a_fileOptions);
    int ReadAndCheckOptionsList(string a_listOptions);
    int Initialize();
    void ShowHelp();


  // -----------------------------------------------------------------------------------------
  // Public member functions called by the main iterative algorithm class
    int EstimateModelParameters(oImageSpace* ap_Image, int a_ite, int a_sset);
    int FitModel(oImageSpace* ap_Image, int a_ite, int a_sset);
    int SaveParametricImages(int a_iteration);


  // -----------------------------------------------------------------------------------------
  // Data members
  protected:
    FLTNB** m2p_parametricImages; 
    FLTNB** m2p_patlakTACs;       
    string m_fileOptions;         
    string m_listOptions;         
    bool m_savePImgFlag;          
};

// Class for automatic insertion (set here the visible dynamic model's name, put the class name as the parameters and do not add semi-colon at the end of the line)
CLASS_DYNAMICMODEL(PatlakModel,iPatlakModel)

#endif