castor-recon.cc File Reference

CASToR: Customizable and Advanced Software for Tomographic Reconstruction
This is the main reconstruction program of the CASToR software. It reads/parses/checks the command-line options, initialize each manager classes with the correct set of options, and launch the reconstruction algorithm (currently managed by oIterativeAlgorithm). For list-mode datafiles, if a sensitivity image is not provided using "-sens", it is generated before reconstruction (managed by oSensitivityGenerator) . More...

#include "gVariables.hh"
#include "gOptions.hh"
#include "oIterativeAlgorithm.hh"
#include "oSensitivityGenerator.hh"
#include "oImageDimensionsAndQuantification.hh"
#include "iDataFilePET.hh"
#include "iDataFileSPECT.hh"
#include "sOutputManager.hh"
#include "sScannerManager.hh"
#include "sRNG.hh"
#include "iScannerPET.hh"
#include "sAddonManager.hh"

Go to the source code of this file.

Functions
void	ShowHelp ()
	Display main command line options for castor-proj.
void	ShowHelpInput ()
void	ShowHelpOutput ()
void	ShowHelpDimensions ()
	Display command line options related to image dimensions for castor-recon.
void	ShowHelpAlgo ()
	Display command line options related to the Optimization algorithm module for castor-recon.
void	ShowHelpProj ()
void	ShowHelpImgp ()
	Display command line options related to the Image Processing module for castor-recon.
void	ShowHelpDynamic ()
void	ShowHelpComputation ()
void	ShowHelpMiscellaneous ()
void	ShowHelpCorrection ()
	Display command line options related to correction settings for castor-recon.
int	main (int argc, char **argv)

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Detailed Description

CASToR: Customizable and Advanced Software for Tomographic Reconstruction
This is the main reconstruction program of the CASToR software. It reads/parses/checks the command-line options, initialize each manager classes with the correct set of options, and launch the reconstruction algorithm (currently managed by oIterativeAlgorithm). For list-mode datafiles, if a sensitivity image is not provided using "-sens", it is generated before reconstruction (managed by oSensitivityGenerator) .

Definition in file castor-recon.cc.

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Function Documentation

int main	(	int	argc,
		char **	argv
	)

Definition at line 558 of file castor-recon.cc.

ShowHelp

(

)

Display main command line options for castor-proj.

Show usage.

Display main command line options for castor-GATERootToCastor.

Display main command line options for castor-GATEMacToGeom.

Display main command line options for castor-datafileConversionEx.

This function is used to print out specific help about the deformation model and its options.

Display main command line options for castor-recon.

Parameters:

a_returnCode

Definition at line 39 of file castor-recon.cc.

ShowHelpAlgo

(

)

Display command line options related to the Optimization algorithm module for castor-recon.

Definition at line 245 of file castor-recon.cc.

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void ShowHelpComputation

(

)

Definition at line 422 of file castor-recon.cc.

ShowHelpCorrection

(

)

Display command line options related to correction settings for castor-recon.

Definition at line 525 of file castor-recon.cc.

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ShowHelpDimensions

(

)

Display command line options related to image dimensions for castor-recon.

Definition at line 206 of file castor-recon.cc.

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void ShowHelpDynamic

(

)

Definition at line 362 of file castor-recon.cc.

ShowHelpImgp

(

)

Display command line options related to the Image Processing module for castor-recon.

Definition at line 325 of file castor-recon.cc.

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void ShowHelpInput

(

)

Definition at line 115 of file castor-recon.cc.

void ShowHelpMiscellaneous

(

)

Definition at line 487 of file castor-recon.cc.

void ShowHelpOutput

(

)

Definition at line 158 of file castor-recon.cc.

void ShowHelpProj

(

)

Definition at line 286 of file castor-recon.cc.